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<h1 class="page">LabInstance numpy!</h1>
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<div class="sect1">
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<h2 id="_quickstart"><a class="anchor" href="#_quickstart"></a>Quickstart</h2>
|
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<div class="sectionbody">
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<div class="paragraph">
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<p>This is a quickstart guide of howto use this <strong>LabInstance</strong></p>
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</div>
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<h3 id="_default_configuration"><a class="anchor" href="#_default_configuration"></a>Default Configuration</h3>
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<div class="ulist">
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<ul>
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<li>
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<p>Working Directory</p>
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</li>
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</ul>
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</div>
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<div class="quoteblock">
|
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<blockquote>
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<div class="paragraph">
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<p>/home/docker/project</p>
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</div>
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</blockquote>
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</div>
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<div class="ulist">
|
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<ul>
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<li>
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<p>Default user</p>
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</li>
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</ul>
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</div>
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<div class="quoteblock">
|
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<blockquote>
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<div class="paragraph">
|
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<p>docker</p>
|
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</div>
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</blockquote>
|
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</div>
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<div class="ulist">
|
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<ul>
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<li>
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<p>Default password</p>
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</li>
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</ul>
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</div>
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<div class="quoteblock">
|
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<blockquote>
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<div class="paragraph">
|
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<p>docker</p>
|
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</div>
|
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</blockquote>
|
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</div>
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<div class="ulist">
|
|
<ul>
|
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<li>
|
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<p>Default password4root</p>
|
|
</li>
|
|
</ul>
|
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</div>
|
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<div class="quoteblock">
|
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<blockquote>
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<div class="paragraph">
|
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<p>pass</p>
|
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</div>
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</blockquote>
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</div>
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</div>
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</div>
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</div>
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<div class="sect1">
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<h2 id="_labinstance_info"><a class="anchor" href="#_labinstance_info"></a>LabInstance Info</h2>
|
|
<div class="sectionbody">
|
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<div class="sect2">
|
|
<h3 id="_numpy"><a class="anchor" href="#_numpy"></a>NumPy</h3>
|
|
<div class="paragraph">
|
|
<p><strong>NumPy</strong> is the fundamental package for scientific computing in Python. It is a Python library that provides a multidimensional array object, various derived objects (such as masked arrays and matrices), and an assortment of routines for fast operations on arrays, including mathematical, logical, shape manipulation, sorting, selecting, I/O, discrete Fourier transforms, basic linear algebra, basic statistical operations, random simulation and much more.</p>
|
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</div>
|
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</div>
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<div class="sect2">
|
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<h3 id="_scipy"><a class="anchor" href="#_scipy"></a>SciPy</h3>
|
|
<div class="paragraph">
|
|
<p><strong>SciPy</strong> is a free and open-source Python library used for scientific computing and technical computing.</p>
|
|
</div>
|
|
<div class="paragraph">
|
|
<p>SciPy contains modules for optimization, linear algebra, integration, interpolation, special functions, FFT, signal and image processing, ODE solvers and other tasks common in science and engineering.</p>
|
|
</div>
|
|
<div class="paragraph">
|
|
<p>Available sub-packages include:</p>
|
|
</div>
|
|
<div class="ulist">
|
|
<ul>
|
|
<li>
|
|
<p>cluster: hierarchical clustering, vector quantization, K-means</p>
|
|
</li>
|
|
<li>
|
|
<p>constants: physical constants and conversion factors</p>
|
|
</li>
|
|
<li>
|
|
<p>fft: Discrete Fourier Transform algorithms</p>
|
|
</li>
|
|
<li>
|
|
<p>fftpack: Legacy interface for Discrete Fourier Transforms</p>
|
|
</li>
|
|
<li>
|
|
<p>integrate: numerical integration routines</p>
|
|
</li>
|
|
<li>
|
|
<p>interpolate: interpolation tools</p>
|
|
</li>
|
|
<li>
|
|
<p>io: data input and output</p>
|
|
</li>
|
|
<li>
|
|
<p>linalg: linear algebra routines</p>
|
|
</li>
|
|
<li>
|
|
<p>misc: miscellaneous utilities (e.g. example images)</p>
|
|
</li>
|
|
<li>
|
|
<p>ndimage: various functions for multi-dimensional image processing</p>
|
|
</li>
|
|
<li>
|
|
<p>ODR: orthogonal distance regression classes and algorithms</p>
|
|
</li>
|
|
<li>
|
|
<p>optimize: optimization algorithms including linear programming</p>
|
|
</li>
|
|
<li>
|
|
<p>signal: signal processing tools</p>
|
|
</li>
|
|
<li>
|
|
<p>sparse: sparse matrices and related algorithms</p>
|
|
</li>
|
|
<li>
|
|
<p>spatial: algorithms for spatial structures such as k-d trees, nearest neighbors, Convex hulls, etc.</p>
|
|
</li>
|
|
<li>
|
|
<p>special: special functions</p>
|
|
</li>
|
|
<li>
|
|
<p>stats: statistical functions</p>
|
|
</li>
|
|
<li>
|
|
<p>weave: tool for writing C/C++ code as Python multiline strings (now deprecated in favor of Cython)</p>
|
|
</li>
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
<div class="sect2">
|
|
<h3 id="_pandas"><a class="anchor" href="#_pandas"></a>pandas</h3>
|
|
<div class="paragraph">
|
|
<p><strong>pandas</strong> is a fast, powerful, flexible and easy to use open source data analysis and manipulation tool,
|
|
built on top of the Python programming language.</p>
|
|
</div>
|
|
</div>
|
|
</div>
|
|
</div>
|
|
<div class="sect1">
|
|
<h2 id="_more_info"><a class="anchor" href="#_more_info"></a>More info</h2>
|
|
<div class="sectionbody">
|
|
<div class="paragraph">
|
|
<p><a href="https://numpy.org/doc/stable/reference/index.html#reference" class="bare" target="_blank" rel="noopener">https://numpy.org/doc/stable/reference/index.html#reference</a></p>
|
|
</div>
|
|
<div class="paragraph">
|
|
<p><a href="https://scipy.org/faq/" class="bare" target="_blank" rel="noopener">https://scipy.org/faq/</a></p>
|
|
</div>
|
|
<div class="paragraph">
|
|
<p><a href="https://pandas.pydata.org/" class="bare" target="_blank" rel="noopener">https://pandas.pydata.org/</a></p>
|
|
</div>
|
|
</div>
|
|
</div>
|
|
<div class="sect1">
|
|
<h2 id="_run_instance"><a class="anchor" href="#_run_instance"></a>RUN INSTANCE</h2>
|
|
<div class="sectionbody">
|
|
<div class="paragraph">
|
|
<p>Swarmlab services can be run in different ways.</p>
|
|
</div>
|
|
<div class="ulist">
|
|
<ul>
|
|
<li>
|
|
<p>You can run them <strong>through the swarmlab hybrid environment</strong> (<a href="http://docs.swarmlab.io/SwarmLab-HowTos/swarmlab/docs/swarmlab/docs/hybrid/start-microservices.html" class="bare">http://docs.swarmlab.io/SwarmLab-HowTos/swarmlab/docs/swarmlab/docs/hybrid/start-microservices.html</a>)</p>
|
|
</li>
|
|
<li>
|
|
<p>or use them individually at will on the <strong>command line of your system</strong></p>
|
|
</li>
|
|
</ul>
|
|
</div>
|
|
<div class="sect2">
|
|
<h3 id="_cli"><a class="anchor" href="#_cli"></a>CLI</h3>
|
|
<div class="quoteblock">
|
|
<blockquote>
|
|
<div class="paragraph">
|
|
<p>git clone …​</p>
|
|
</div>
|
|
</blockquote>
|
|
</div>
|
|
<div class="quoteblock">
|
|
<blockquote>
|
|
<div class="paragraph">
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<p>cd [DIRECTORY]</p>
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</div>
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</blockquote>
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</div>
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</div>
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<div class="sect2">
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<h3 id="_help"><a class="anchor" href="#_help"></a>help</h3>
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|
<div class="quoteblock">
|
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<blockquote>
|
|
<div class="paragraph">
|
|
<p>make help</p>
|
|
</div>
|
|
</blockquote>
|
|
</div>
|
|
<div class="sect3">
|
|
<h4 id="_create_service"><a class="anchor" href="#_create_service"></a>create service</h4>
|
|
<div class="quoteblock">
|
|
<blockquote>
|
|
<div class="paragraph">
|
|
<p>make create</p>
|
|
</div>
|
|
</blockquote>
|
|
</div>
|
|
</div>
|
|
</div>
|
|
<div class="sect2">
|
|
<h3 id="_start_service"><a class="anchor" href="#_start_service"></a>start service</h3>
|
|
<div class="quoteblock">
|
|
<blockquote>
|
|
<div class="paragraph">
|
|
<p>make start</p>
|
|
</div>
|
|
</blockquote>
|
|
</div>
|
|
</div>
|
|
<div class="sect2">
|
|
<h3 id="_stop_service"><a class="anchor" href="#_stop_service"></a>stop service</h3>
|
|
<div class="quoteblock">
|
|
<blockquote>
|
|
<div class="paragraph">
|
|
<p>make stop</p>
|
|
</div>
|
|
</blockquote>
|
|
</div>
|
|
</div>
|
|
<div class="sect2">
|
|
<h3 id="_list_service"><a class="anchor" href="#_list_service"></a>list service</h3>
|
|
<div class="quoteblock">
|
|
<blockquote>
|
|
<div class="paragraph">
|
|
<p>make list</p>
|
|
</div>
|
|
</blockquote>
|
|
</div>
|
|
</div>
|
|
<div class="sect2">
|
|
<h3 id="_clean_service"><a class="anchor" href="#_clean_service"></a>clean service</h3>
|
|
<div class="quoteblock">
|
|
<blockquote>
|
|
<div class="paragraph">
|
|
<p>make clean</p>
|
|
</div>
|
|
</blockquote>
|
|
</div>
|
|
</div>
|
|
</div>
|
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